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    Home » Recipes » Gluten Free Recipes

    Wholesome Zucchini Muffins

    Published: Feb 16, 2026 · This post may contain affiliate links · Leave a Comment

    Jump to Recipe Jump to Video Print Recipe

    These zucchini muffins are naturally sweetened with coconut sugar and maple syrup instead of refined sugar. Moist, lightly sweet, and packed with fresh zucchini, they’re perfect for a wholesome breakfast or snack.

    hand holding half a zucchini muffin

    Feel-Good Zucchini Muffins

    Guys, I am obsessed with these zucchini muffins! They're muffin perfection - sweet but not too sweet, moist but not dense, and packed with melty oozing chocolate.

    I wanted a guilt-free zucchini muffin so I swapped white sugar with maple syrup and coconut sugar - my favorite pair!

    You won't even be able to tell these zucchini muffins are made with wholesome ingredients! They're just TOO good. Even my pickiest kiddo liked them!

    Key Ingredients

    maple syrup, coconut oil, greek yogurt, zucchini, egg, chocolate chips, coconut sugar, gluten-free flour.
    • Coconut sugar - A less processed option than white sugar, I've grown to love the caramel-like flavor of coconut sugar.
    • Maple syrup - Be sure to use 100% maple syrup, not pancake syrup which is really just corn syrup!
    • Coconut oil - You can find this at any well-stocked grocery store near the other oils. I use refined coconut oil because it has a neutral flavor.
    • Greek yogurt - This keeps the muffins nice and moist, plus it adds a little bit of protein.
    • Gluten-free flour - I used Bob's Red Mill's 1 to 1 Gluten Free Baking Flour. I highly recommend it if you avoid gluten. You can find it at Target, Walmart, or on Amazon.
    • Zucchini - Bigger isn't always better when it comes to produce! Smaller produce typically has a better and sweeter flavor.
    • Chocolate chips - I used dark chocolate chips, but milk or semi-sweet work great too! My favorite brand is Ghirardelli's bittersweet chocolate chips.
    hand holding a zucchini muffin

    Instructions

    This is a super simple, one-bowl situation! Just mix, scoop, and bake. For those who like a bit more guidance, here's what you need to do:

    • Mix the coconut sugar, maple syrup, and coconut oil. It will stay separated at first, but then it will emulsify and get silky smooth.
    • Stir in the greek yogurt and egg.
    a bowl with melted coconut oil, coconut sugar, and maple syrup in it.
    a bowl with maple syrup, coconut oil, and coconut sugar mixed until smooth.
    maple syrup and coconut oil mixed together with greek yogurt and an egg on top
    greek yogurt, egg, coconut sugar, maple syrup, and coconut oil mixed together in a bowl.
    • Add the dry ingredients until a batter forms. The consistency should be similar to pancake batter - thick but not too thick.
    • Add the shredded zucchini. There's no need to squeeze out the excess moisture. Stir in the chocolate chips.
    gluten-free flour on a bowl of mixed egg, maple syrup, and coconut oil.
    zucchini muffin batter in a bowl with shredded zucchini on top.
    stirring a bowl of zucchini muffin batter with a spatula.
    a bowl of zucchini muffin batter with chocolate chips on top.
    • Scoop the mixture into a greased muffin tin. You should fill the holes all the way to the top with 6 muffins total.
    • Bake the muffins for 25 minutes. The tops should rise up nicely and turn golden brown.
    zucchini muffin batter in a muffin tin.
    baked zucchini muffins in a muffin tin.

    Expert Tips

    • Zucchini is mostly water so it shreds very easily! I just used a handheld cheese shredder. Avoid the tiny holes.
    • Don't pack the zucchini in the measuring cup. You don't need to press it firmly into the cup. Just loosely pack it into the cup so you don't get too much.
    • Bake the muffins until the tops bounce back and a toothpick comes out clean - about 25 minutes.
    zucchini muffins

    Storage

    • Let the muffins cool completely before you store them! Don't try to store warm muffins or they will condensate and perish quickly.
    • Once the muffins are cool, transfer them to a zip-top bag or airtight container. They will last for up to 3 days on the counter.
    • Zucchini muffins are freezer-friendly too! Put them in a freezer bag or container and freeze for up to 3 months. You can thaw them on the counter or in the microwave.

    More Muffin Recipes

    • Paleo Pumpkin Muffins
    • Almond Flour Banana Muffins
    • Zucchini Bread
    • Gluten Free Zucchini Bread
    hand holding half a zucchini muffin

    Wholesome Zucchini Muffins

    Carolyn
    These zucchini muffins are naturally sweetened with coconut sugar and maple syrup instead of refined sugar. Moist, lightly sweet, and packed with fresh zucchini, they’re perfect for a wholesome breakfast or snack.
    Print Recipe
    Prep Time 10 minutes mins
    Cook Time 25 minutes mins
    Total Time 35 minutes mins
    Course Breakfast, Dessert, Snack
    Cuisine American
    Servings 6 muffins
    Calories 332 kcal

    Equipment

    • Muffin Pan

    Ingredients
      

    • ⅓ cup coconut sugar
    • ¼ cup maple syrup
    • ¼ cup coconut oil
    • 2 tablespoons plain greek yogurt
    • 1 large egg
    • ¾ cup + 1 tablespoon gluten-free all-purpose flour or regular flour
    • ½ teaspoon baking soda
    • ½ teaspoon baking powder
    • ¾ cup shredded zucchini (Do not pack)
    • ½ cup dark chocolate chips

    Instructions
     

    • Preheat oven to 350 degrees Fahrenheit. 
    • In a mixing bowl, combine the coconut sugar, maple syrup, and coconut oil. Stir until emulsified. 
    • Add the greek yogurt and the egg and stir until incorporated. 
    • Add the flour, baking soda, and baking powder to the batter and stir until a batter forms. 
    • Stir in the shredded zucchini until evenly dispersed throughout the batter. Add the chocolate chips and stir to combine.
    • Spray a muffin tin with nonstick cooking spray. Scoop the batter into 7 of the muffin cavities. 
    • Bake for 25 minutes. Let the muffins cool some then enjoy warm! 

    Video

    Nutrition

    Calories: 332kcalCarbohydrates: 47gProtein: 6gFat: 15gSaturated Fat: 12gPolyunsaturated Fat: 1gMonounsaturated Fat: 1gTrans Fat: 0.003gCholesterol: 28mgSodium: 175mgPotassium: 183mgFiber: 4gSugar: 20gVitamin A: 72IUVitamin C: 3mgCalcium: 111mgIron: 1mg
    Keyword zucchini muffins
    Tried this recipe?Let us know how it was!

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    Hi friends!

    My name is Carolyn and I'm the food-obsessed creative behind Caramel and Cashews!

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